corpus.blog
41554 blogs · [ { "id": "01a08765-ac03-7159-bf3c-10770befe13a", "title": "Loukides, Pissis, Thankachan, Zuba :: Suffix-Prefix Queries on a Dictionary", "url": "https://curiouscoding.nl/posts/apsp/", "published_at": "2023-07-06T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770ca5a3c2", "title": "DSB 2023", "url": "https://curiouscoding.nl/posts/dsb-2023/", "published_at": "2023-03-19T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770cdf74a4", "title": "Doctoral plan", "url": "https://curiouscoding.nl/posts/research-proposal/", "published_at": "2022-12-11T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770d612e1f", "title": "One Year Of Rust", "url": "https://curiouscoding.nl/posts/one-year-of-rust/", "published_at": "2022-11-16T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770d999cc8", "title": "The complexity and performance of WFA and band doubling", "url": "https://curiouscoding.nl/posts/wfa-edlib-perf/", "published_at": "2022-11-16T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770e201f5e", "title": "String algorithm visualizations", "url": "https://curiouscoding.nl/posts/alg-viz/", "published_at": "2022-11-07T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770e3292eb", "title": "Thoughts on linear programming", "url": "https://curiouscoding.nl/posts/linear-programming/", "published_at": "2022-11-03T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770e94b772", "title": "Local Doubling", "url": "https://curiouscoding.nl/posts/local-doubling/", "published_at": "2022-10-18T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770f58eda9", "title": "BWT and FM-index", "url": "https://curiouscoding.nl/posts/bwt/", "published_at": "2022-10-17T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10770fa98444", "title": "A Combinatorial Identity", "url": "https://curiouscoding.nl/posts/a-combinatorial-identity/", "published_at": "2022-10-15T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077100fc097", "title": "Tensor embedding preserves Hamming distance", "url": "https://curiouscoding.nl/posts/tensor-embedding-distance/", "published_at": "2022-10-13T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107710690003", "title": "Linear-time suffix array construction", "url": "https://curiouscoding.nl/posts/suffix-array-construction/", "published_at": "2022-10-12T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077109c2807", "title": "Competitive Programming Lecture", "url": "https://curiouscoding.nl/posts/competitive-programming-lecture/", "published_at": "2022-09-27T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107711467b65", "title": "Reducing A* memory usage using fronts", "url": "https://curiouscoding.nl/posts/astar-memory-usage/", "published_at": "2022-09-25T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077116313f3", "title": "Speeding up A*: computational volumes and path-pruning", "url": "https://curiouscoding.nl/posts/speeding-up-astar/", "published_at": "2022-09-22T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107711d27d46", "title": "Revised Oxford Bioinformatics latex template", "url": "https://curiouscoding.nl/posts/bioinformatics-template/", "published_at": "2022-09-22T10:13:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771264faa8", "title": "Linear memory WFA?", "url": "https://curiouscoding.nl/posts/linear-memory-wfa/", "published_at": "2022-08-16T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077131523e9", "title": "Transforming match bonus into cost", "url": "https://curiouscoding.nl/posts/alignment-scores-transform/", "published_at": "2022-08-15T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771330309b", "title": "Paper styleguide", "url": "https://curiouscoding.nl/posts/styleguide/", "published_at": "2022-08-05T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107714153d6e", "title": "Diamond optimisation for diagonal transition", "url": "https://curiouscoding.nl/posts/diamond-optimization/", "published_at": "2022-07-31T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077149634ed", "title": "Bidirectional A*", "url": "https://curiouscoding.nl/posts/bidirectional-astar/", "published_at": "2022-07-28T15:59:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077154d6a5d", "title": "The BiWFA meeting condition", "url": "https://curiouscoding.nl/posts/biwfa-meeting-condition/", "published_at": "2022-07-10T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107716257e4b", "title": "A* variants", "url": "https://curiouscoding.nl/posts/astar-variants/", "published_at": "2022-06-12T10:04:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107716b235e2", "title": "IGGSY 22 Slides", "url": "https://curiouscoding.nl/posts/iggsy-presentation-slides/", "published_at": "2022-06-12T10:04:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077171126c1", "title": "Benchmark attention points", "url": "https://curiouscoding.nl/posts/benchmarks/", "published_at": "2022-04-28T21:33:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107717c95763", "title": "Motivation", "url": "https://curiouscoding.nl/posts/motivation/", "published_at": "2022-04-28T21:22:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107718c0125b", "title": "Proof sketch for linear time seed heuristic alignment", "url": "https://curiouscoding.nl/posts/linear-time-pa/", "published_at": "2022-04-23T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107719ac3acd", "title": "Variations on the WFA recursion", "url": "https://curiouscoding.nl/posts/wfa-variations/", "published_at": "2022-04-17T01:14:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771a580cdc", "title": "Publications", "url": "https://curiouscoding.nl/publications/", "published_at": "2022-04-14T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771b21bf95", "title": "Glossary", "url": "https://curiouscoding.nl/posts/glossary/", "published_at": "2022-04-13T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771ba502b2", "title": "A survey of exact global pairwise alignment", "url": "https://curiouscoding.nl/posts/pairwise-alignment-history/", "published_at": "2022-03-31T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771c54b2b1", "title": "Pruning for A* heuristics", "url": "https://curiouscoding.nl/posts/pruning/", "published_at": "2021-12-10T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771c664610", "title": "AStarix", "url": "https://curiouscoding.nl/posts/astarix/", "published_at": "2021-11-12T12:05:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771d2aa2da", "title": "Neighbour joining", "url": "https://curiouscoding.nl/posts/neighbour-joining/", "published_at": "2021-11-12T10:57:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771d321123", "title": "UPGMA", "url": "https://curiouscoding.nl/posts/upgma/", "published_at": "2021-10-28T09:56:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771e155f28", "title": "RTFE", "url": "https://curiouscoding.nl/posts/rfte/", "published_at": "2021-10-22T13:16:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771e9ef879", "title": "1st law of Procrastination", "url": "https://curiouscoding.nl/posts/procrastination/", "published_at": "2021-10-22T09:46:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771eef38d4", "title": "Data should be reviewed", "url": "https://curiouscoding.nl/posts/data-should-be-reviewed/", "published_at": "2021-10-22T09:41:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10771f5f1132", "title": "Spaced K-mer Seeded Distance", "url": "https://curiouscoding.nl/posts/spaced-kmer-distance/", "published_at": "2021-10-19T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077205de83e", "title": "Open Science", "url": "https://curiouscoding.nl/posts/open-science/", "published_at": "2021-10-18T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107720e6796f", "title": "Hugo and ox-hugo", "url": "https://curiouscoding.nl/posts/hugo/", "published_at": "2021-10-13T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107721af2b97", "title": "Hello, World!", "url": "https://curiouscoding.nl/posts/hello-world/", "published_at": "2021-10-12T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107721c366ae", "title": "Spaced k-mer and assembler methods", "url": "https://curiouscoding.nl/posts/spaced-kmer-review/", "published_at": "2021-07-13T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107722b5ee2c", "title": "Ideas for assembling [long] reads", "url": "https://curiouscoding.nl/posts/thoughts-on-assembling/", "published_at": "2021-07-08T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10772359535f", "title": "Hamming Similarity Search", "url": "https://curiouscoding.nl/posts/hamming-similarity-search/", "published_at": "2021-07-07T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10772381a6c2", "title": "Detached fullscreen in Sway", "url": "https://curiouscoding.nl/posts/sway-fullscreen/", "published_at": "2021-07-01T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077242f9d30", "title": "Open source contributions", "url": "https://curiouscoding.nl/posts/oss-contributions/", "published_at": "2021-07-01T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077243a6f79", "title": "Powersearch with Vimium", "url": "https://curiouscoding.nl/posts/vimium/", "published_at": "2021-07-01T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107724db1e56", "title": "Wayland utilities", "url": "https://curiouscoding.nl/posts/wayland/", "published_at": "2021-07-01T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077259d69d0", "title": "Browsing in the dark with Vimium and Dark Reader", "url": "https://curiouscoding.nl/posts/dark-mode/", "published_at": "2021-06-30T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077267b5afe", "title": "Window switching in Sway", "url": "https://curiouscoding.nl/posts/sway-window-switching/", "published_at": "2021-06-30T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107726f22855", "title": "Clean your homedir with XDG Base Dir", "url": "https://curiouscoding.nl/posts/xdg-base-dir/", "published_at": "2021-06-29T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107726f5a067", "title": "Emacs Doom", "url": "https://curiouscoding.nl/posts/emacs/", "published_at": "2021-06-29T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107727681e93", "title": "Environment variables done once", "url": "https://curiouscoding.nl/posts/environment-variables/", "published_at": "2021-06-29T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107727c26635", "title": "28000x speedup with Numba.CUDA", "url": "https://curiouscoding.nl/posts/numba-cuda-speedup/", "published_at": "2021-05-23T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10772881ac75", "title": "X1 Extreme Gen 3 - Migrating to Wayland", "url": "https://curiouscoding.nl/posts/x1e3/", "published_at": "2021-05-15T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107728ed7ab5", "title": "SE Endurance: Early game", "url": "https://curiouscoding.nl/posts/factorio-early-game/", "published_at": "2021-04-25T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-1077298910fd", "title": "Hashcode 2021 Finals", "url": "https://curiouscoding.nl/posts/hashcode-2021-finals/", "published_at": "2021-04-23T22:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-107729fcc6fc", "title": "Hashcode 2021: A lucky ride", "url": "https://curiouscoding.nl/posts/hashcode-2021/", "published_at": "2021-02-28T23:00:00+00:00" }, { "id": "01a08765-ac03-7159-bf3c-10772a4b1c56", "title": "About", "url": "https://curiouscoding.nl/about/", "published_at": null }, { "id": "01a08765-ac03-7159-bf3c-10772b0e12dd", "title": "Readme", "url": "https://curiouscoding.nl/readme/", "published_at": null } ] posts Claim your blog
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2023

Loukides, Pissis, Thankachan, Zuba :: Suffix-Prefix Queries on a Dictionaryoriginal ↗
6 Jul 2023
DSB 2023original ↗
19 Mar 2023

2022

Doctoral planoriginal ↗
11 Dec 2022
One Year Of Rustoriginal ↗
16 Nov 2022
The complexity and performance of WFA and band doublingoriginal ↗
16 Nov 2022
String algorithm visualizationsoriginal ↗
7 Nov 2022
Thoughts on linear programmingoriginal ↗
3 Nov 2022
Local Doublingoriginal ↗
18 Oct 2022
BWT and FM-indexoriginal ↗
17 Oct 2022
A Combinatorial Identityoriginal ↗
15 Oct 2022
Tensor embedding preserves Hamming distanceoriginal ↗
13 Oct 2022
Linear-time suffix array constructionoriginal ↗
12 Oct 2022
Competitive Programming Lectureoriginal ↗
27 Sept 2022
Reducing A* memory usage using frontsoriginal ↗
25 Sept 2022
Speeding up A*: computational volumes and path-pruningoriginal ↗
22 Sept 2022
Revised Oxford Bioinformatics latex templateoriginal ↗
22 Sept 2022
Linear memory WFA?original ↗
16 Aug 2022
Transforming match bonus into costoriginal ↗
15 Aug 2022
Paper styleguideoriginal ↗
5 Aug 2022
Diamond optimisation for diagonal transitionoriginal ↗
31 Jul 2022
Bidirectional A*original ↗
28 Jul 2022
The BiWFA meeting conditionoriginal ↗
10 Jul 2022
A* variantsoriginal ↗
12 Jun 2022
IGGSY 22 Slidesoriginal ↗
12 Jun 2022
Benchmark attention pointsoriginal ↗
28 Apr 2022
Motivationoriginal ↗
28 Apr 2022
Proof sketch for linear time seed heuristic alignmentoriginal ↗
23 Apr 2022
Variations on the WFA recursionoriginal ↗
17 Apr 2022
Publicationsoriginal ↗
14 Apr 2022
Glossaryoriginal ↗
13 Apr 2022
A survey of exact global pairwise alignmentoriginal ↗
31 Mar 2022

2021

Pruning for A* heuristicsoriginal ↗
10 Dec 2021
AStarixoriginal ↗
12 Nov 2021
Neighbour joiningoriginal ↗
12 Nov 2021
UPGMAoriginal ↗
28 Oct 2021
RTFEoriginal ↗
22 Oct 2021
1st law of Procrastinationoriginal ↗
22 Oct 2021
Data should be reviewedoriginal ↗
22 Oct 2021
Spaced K-mer Seeded Distanceoriginal ↗
19 Oct 2021
Open Scienceoriginal ↗
18 Oct 2021
Hugo and ox-hugooriginal ↗
13 Oct 2021
Hello, World!original ↗
12 Oct 2021
Spaced k-mer and assembler methodsoriginal ↗
13 Jul 2021
Ideas for assembling [long] readsoriginal ↗
8 Jul 2021
Hamming Similarity Searchoriginal ↗
7 Jul 2021
Detached fullscreen in Swayoriginal ↗
1 Jul 2021
Open source contributionsoriginal ↗
1 Jul 2021
Powersearch with Vimiumoriginal ↗
1 Jul 2021
Wayland utilitiesoriginal ↗
1 Jul 2021
Browsing in the dark with Vimium and Dark Readeroriginal ↗
30 Jun 2021
Window switching in Swayoriginal ↗
30 Jun 2021
Clean your homedir with XDG Base Diroriginal ↗
29 Jun 2021
Emacs Doomoriginal ↗
29 Jun 2021
Environment variables done onceoriginal ↗
29 Jun 2021
28000x speedup with Numba.CUDAoriginal ↗
23 May 2021
X1 Extreme Gen 3 - Migrating to Waylandoriginal ↗
15 May 2021
SE Endurance: Early gameoriginal ↗
25 Apr 2021
Hashcode 2021 Finalsoriginal ↗
23 Apr 2021
Hashcode 2021: A lucky rideoriginal ↗
28 Feb 2021

Undated

Aboutoriginal ↗
—
Readmeoriginal ↗
—
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