Record · corpus.blog/posts/01a08765-ac02-724b-9f4f-76c839a14a5a

Thesis: Optimal Throughput Bioinformatics

curiouscoding.nl · published 9 April 2025

A record is what was published and who pointed at it. The text of the post is not held here: read it at the source, or at its Wayback capture.

Read the post at curiouscoding.nl Wayback capture

0blogs citing

First cited: —
Most recent: —
Rank this month: not ranked
Links from this post: 24
Words captured: 3,967

Cited by

No blog we hold has cited this post yet.

Links from this post

Link

Host

https://curiouscoding.nl/thesis.pdf

curiouscoding.nl

A History of Pairwise Alignment Read at the source ↗

curiouscoding.nl

https://curiouscoding.nl/papers/astarpa.pdf

curiouscoding.nl

A*PA2: Up to 19x faster exact global alignment Read at the source ↗

curiouscoding.nl

https://curiouscoding.nl/papers/astarpa2.pdf

curiouscoding.nl

Beyond Global Alignment Read at the source ↗

curiouscoding.nl

Low Density Minimizers Read at the source ↗

curiouscoding.nl

High Throughput Bioinformatics Read at the source ↗

curiouscoding.nl

SimdMinimizers: Computing random minimizers, fast Read at the source ↗

curiouscoding.nl

PtrHash: Minimal Perfect Hashing at RAM Throughput Read at the source ↗

curiouscoding.nl

https://curiouscoding.nl/static/papers/simd-minimizers-preprint.pdf

curiouscoding.nl

https://curiouscoding.nl/papers/ptrhash.pdf

curiouscoding.nl

https://curiouscoding.nl/static/papers/u-index-preprint.pdf

curiouscoding.nl

https://doi.org/10.4230/LIPIcs.SEA.2025.4

doi.org

https://doi.org/10.4230/LIPIcs.WABI.2024.17

doi.org

https://doi.org/10.3929/ETHZ-C-000783091

doi.org

https://doi.org/10.4230/LIPIcs.SEA.2025.21

doi.org

https://doi.org/10.1186/s13015-025-00270-0

doi.org

https://doi.org/10.1093/bioinformatics/btae032

doi.org

https://doi.org/10.4230/LIPIcs.SEA.2025.20

doi.org

https://doi.org/10.4230/LIPIcs.WABI.2024.11

doi.org

https://doi.org/10.1093/bioinformatics/btae736

doi.org

https://doi.org/10.1145/3582490

doi.org

https://doi.org/10.1093/bioinformatics/btac245

doi.org