Record · corpus.blog/posts/01a08765-ac01-71c2-80fc-326e1b3cb045

Sassy: fuzzy searching DNA sequences using SIMD

curiouscoding.nl · published 3 June 2026

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https://github.com/rickbeeloo

github.com

https://curiouscoding.nl/papers/sassy.pdf

curiouscoding.nl

https://doi.org/10.1093/bioinformatics/btag244

doi.org

https://github.com/RagnarGrootKoerkamp/sassy

github.com

https://curiouscoding.nl/slides/sassy/slides/

curiouscoding.nl

https://recomb-seq.github.io/seq2026/program

recomb-seq.github.io

https://github.com/RagnarGrootKoerkamp/sassy/releases

github.com

https://crates.io/crates/sassy

crates.io

https://docs.rs/sassy/latest/sassy/

docs.rs

https://docs.rs/sassy/latest/sassy/struct.Searcher.html

docs.rs

https://github.com/RagnarGrootKoerkamp/sassy/blob/master/python/README.md

github.com

https://github.com/RagnarGrootKoerkamp/sassy/blob/master/c/README.md

github.com

https://sounkou-bioinfo.github.io/Rsassy/

sounkou-bioinfo.github.io

https://github.com/RagnarGrootKoerkamp/astar-pairwise-aligner

github.com

A History of Pairwise Alignment Read at the source ↗

curiouscoding.nl

https://curiouscoding.nl/papers/sassy2-preprint.pdf

curiouscoding.nl

https://doi.org/10.64898/2026.03.10.710811

doi.org

https://doi.org/10.1093/bioinformatics/btag349

doi.org

https://www.reddit.com/r/rust/comments/1twnnq0

reddit.com

https://doi.org/10.1186/s12859-016-0930-z

doi.org

https://doi.org/10.1186/1471-2105-9-11

doi.org

https://doi.org/10.4230/LIPIcs.WABI.2024.17

doi.org

https://doi.org/10.1093/bioinformatics/btae032

doi.org

https://doi.org/10.1145/316542.316550

doi.org

https://doi.org/10.1145/375360.375365

doi.org

https://doi.org/10.1093/bioinformatics/btw753

doi.org