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Using AI to identify genetic variants in tumors with DeepSomatic

Google Research · published 16 October 2025

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23 Dec 2025

Links from this post

Link
Host
https://genomics.ucsc.edu/
genomics.ucsc.edu
https://www.nature.com/articles/s41587-025-02839-x
nature.com
https://www.nature.com/nbt/
nature.com
https://github.com/google/deepsomatic
github.com
https://github.com/CASTLE-Panel/castle
github.com
https://health.google/mammography/
health.google
https://research.google/blog/computer-aided-diagnosis-for-lung-cancer-screening/
research.google
https://blog.google/technology/health/google-ai-institute-womens-cancers/
blog.google
https://www.genome.gov/genetics-glossary/Human-Genome-Reference-Sequence
genome.gov
https://research.google/blog/deepvariant-highly-accurate-genomes-with-deep-neural-networks/
research.google
https://www.genomicseducation.hee.nhs.uk/genotes/knowledge-hub/constitutional-germline-vs-somatic-tumour-variants/
genomicseducation.hee.nhs.uk
https://google.github.io/deepvariant/posts/2020-02-20-looking-through-deepvariants-eyes/
google.github.io
https://en.wikipedia.org/wiki/Convolutional_neural_network
en.wikipedia.org
https://www.cancer.gov/
cancer.gov
https://www.illumina.com/systems/sequencing-platforms.html
illumina.com
https://www.pacb.com/technology/hifi-sequencing/
pacb.com
https://nanoporetech.com/platform
nanoporetech.com
https://pmc.ncbi.nlm.nih.gov/articles/PMC4242521/
pmc.ncbi.nlm.nih.gov
https://gatk.broadinstitute.org/hc/en-us/articles/360037593851-Mutect2
gatk.broadinstitute.org
https://www.nature.com/articles/s41592-018-0051-x
nature.com
https://www.biorxiv.org/content/10.1101/2023.08.17.553778v1
biorxiv.org
https://en.wikipedia.org/wiki/F-score
en.wikipedia.org
https://en.wikipedia.org/wiki/Fixation_(histology
en.wikipedia.org
https://en.wikipedia.org/wiki/Exome_sequencing
en.wikipedia.org
https://www.mayoclinic.org/diseases-conditions/glioblastoma/symptoms-causes/syc-20569077
mayoclinic.org
https://www.childrensmercy.org/childrens-mercy-research-institute/about/
childrensmercy.org
https://www.childrensmercy.org/departments-and-clinics/division-of-pediatric-hematology-oncology-and-blood-and-marrow-transplantation/cancer-center/leukemia-and-lymphoma-program/understanding-leukemia/
childrensmercy.org