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"https://kaushikghose.wordpress.com/2014/07/03/hdf5-is-not-for-fast-access/", "published_at": "2014-07-03T19:41:00+00:00" }, { "id": "01a0bbcb-f32b-7304-adc7-8488b18e4071", "title": "A note on Python’s __exit__() and errors", "url": "https://kaushikghose.wordpress.com/2014/06/20/a-note-on-pythons-__exit__-and-errors/", "published_at": "2014-06-20T15:55:00+00:00" }, { "id": "01a0bbcb-f32b-7304-adc7-8488b1e5d717", "title": "The masked chromosome", "url": "https://kaushikghose.wordpress.com/2014/06/16/the-masked-chromosome/", "published_at": "2014-06-16T09:30:56+00:00" }, { "id": "01a0bbcb-f32b-7304-adc7-8488b22a018e", "title": "Feedburner and the fragmentation of google", "url": "https://kaushikghose.wordpress.com/2014/06/01/feedburner-and-the-fragmentation-of-google/", "published_at": "2014-06-01T12:02:00+00:00" }, { "id": "01a0bbcb-f32b-7304-adc7-8488b3267928", "title": "Python ‘or’", "url": "https://kaushikghose.wordpress.com/2014/05/21/python-or/", "published_at": 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"url": "https://kaushikghose.wordpress.com/2014/04/30/how-to-tell-if-a-property-is-a-rental/", "published_at": "2014-04-30T12:33:00+00:00" }, { "id": "01a0bbd0-d01e-7393-9493-c3e1704d69c2", "title": "What makes marine grade wire special?", "url": "https://kaushikghose.wordpress.com/2014/04/29/what-makes-marine-grade-wire-special/", "published_at": "2014-04-29T09:54:00+00:00" }, { "id": "01a0bbd0-d01e-7393-9493-c3e170d1e654", "title": "Breaking BAM", "url": "https://kaushikghose.wordpress.com/2014/04/28/breaking-bam/", "published_at": "2014-04-28T17:24:00+00:00" }, { "id": "01a0bbd0-d01e-7393-9493-c3e1711666da", "title": "Adjusting sticking doors", "url": "https://kaushikghose.wordpress.com/2014/04/26/adjusting-sticking-doors/", "published_at": "2014-04-27T03:16:00+00:00" }, { "id": "01a0bbd0-d01e-7393-9493-c3e1720dde8d", "title": "Bash conditionals", "url": "https://kaushikghose.wordpress.com/2014/04/23/bash-conditionals/", "published_at": "2014-04-23T10:38:00+00:00" }, { "id": "01a0bbd0-d01e-7393-9493-c3e17258ed0e", "title": "I’m puzzled by executive compensation", "url": "https://kaushikghose.wordpress.com/2014/04/17/im-puzzled-by-executive-compensation/", "published_at": "2014-04-17T15:45:19+00:00" }, { "id": "01a0bbd0-d01e-7393-9493-c3e17270c85f", "title": "The magic of mmap", "url": "https://kaushikghose.wordpress.com/2014/04/14/the-magic-of-mmap/", "published_at": "2014-04-14T17:57:00+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b3d1dba5", "title": "The logging overhead.", "url": "https://kaushikghose.wordpress.com/2014/04/14/the-logging-overhead/", "published_at": "2014-04-14T15:13:00+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b415bcda", "title": "The utility of wealth", "url": "https://kaushikghose.wordpress.com/2014/04/10/the-utility-of-wealth/", "published_at": "2014-04-10T11:15:13+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b4ee9ad5", "title": "Bash: print commands as they execute", "url": "https://kaushikghose.wordpress.com/2014/04/08/bash-print-commands-as-they-execute/", "published_at": "2014-04-09T01:41:00+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b549242c", "title": "Python: passing a mix of keyword arguments and dictionary arguments to a function", "url": "https://kaushikghose.wordpress.com/2014/04/03/python-passing-a-mix-of-keyword-arguments-and-dictionary-arguments-to-a-function/", "published_at": "2014-04-04T00:26:00+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b643b5ac", "title": "Washing machine hoses", "url": "https://kaushikghose.wordpress.com/2014/03/31/washing-machine-hoses/", "published_at": "2014-03-31T20:18:00+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b6ab5f8f", "title": "execfile and imported modules", "url": "https://kaushikghose.wordpress.com/2014/03/31/execfile-and-imported-modules/", "published_at": "2014-03-31T19:36:00+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b6c1eb1a", "title": "Raw (unaligned), paired reads in a BAM file", "url": "https://kaushikghose.wordpress.com/2014/03/28/raw-unaligned-paired-reads-in-a-bam-file/", "published_at": "2014-03-28T18:31:05+00:00" }, { "id": "01a0bbd4-d009-728d-aca0-f3a7b729ddbe", "title": "SAM! BAM! VCF! 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"https://kaushikghose.wordpress.com/2014/02/10/adventures-in-hiring-plumbers/", "published_at": "2014-02-10T16:07:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e3c73a24", "title": "How much space do I need?", "url": "https://kaushikghose.wordpress.com/2014/02/10/how-much-space-do-i-need/", "published_at": "2014-02-10T16:05:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e4044ab7", "title": "Life insurance = sleaze", "url": "https://kaushikghose.wordpress.com/2014/02/10/life-insurance-sleaze/", "published_at": "2014-02-10T15:33:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e454cbdb", "title": "Refrigerators", "url": "https://kaushikghose.wordpress.com/2014/02/10/refrigerators/", "published_at": "2014-02-10T15:32:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e49a0620", "title": "Title Insurance", "url": "https://kaushikghose.wordpress.com/2014/02/10/title-insurance/", "published_at": "2014-02-10T14:44:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e56b0e3e", "title": "GFCI", "url": "https://kaushikghose.wordpress.com/2014/02/10/gfci/", "published_at": "2014-02-10T14:42:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e5d9ba8c", "title": "Interior modeling software", "url": "https://kaushikghose.wordpress.com/2014/02/10/interior-modeling-software/", "published_at": "2014-02-10T14:41:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e6d20882", "title": "Oliver", "url": "https://kaushikghose.wordpress.com/2014/02/10/oliver/", "published_at": "2014-02-10T14:40:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e7b44b2b", "title": "A Dishwasher in an old kitchen", "url": "https://kaushikghose.wordpress.com/2014/02/10/a-dishwasher-in-an-old-kitchen/", "published_at": "2014-02-10T14:39:00+00:00" }, { "id": "01a0bbdc-2673-7385-8ce0-b3d9e8810b1c", "title": "What to look for on a tour", "url": "https://kaushikghose.wordpress.com/2014/02/10/what-to-look-for-on-a-tour/", "published_at": "2014-02-10T14:38:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420325ce53", "title": "Lead", "url": "https://kaushikghose.wordpress.com/2014/02/10/lead/", "published_at": "2014-02-10T14:37:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c54203396068", "title": "Sunlight", "url": "https://kaushikghose.wordpress.com/2014/02/10/sunlight/", "published_at": "2014-02-10T14:36:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c54203f1eef7", "title": "Picking a home inspector", "url": "https://kaushikghose.wordpress.com/2014/02/10/picking-a-home-inspector/", "published_at": "2014-02-10T14:35:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420461e7bb", "title": "Property and Privacy", "url": "https://kaushikghose.wordpress.com/2014/02/10/property-and-privacy/", "published_at": "2014-02-10T14:30:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420520c1da", "title": "Central Vacuum Systems", "url": "https://kaushikghose.wordpress.com/2014/02/10/central-vacuum-systems/", "published_at": "2014-02-10T14:24:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420574dd23", "title": "A lame adventure with progressiveCactus", "url": "https://kaushikghose.wordpress.com/2014/02/06/a-lame-adventure-with-progressivecactus/", "published_at": "2014-02-06T14:32:39+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420655ec0a", "title": "Compiling progressiveCactus on Mac Mavericks", "url": "https://kaushikghose.wordpress.com/2014/01/25/compiling-progressivecactus-on-mac-mavericks/", "published_at": "2014-01-25T14:05:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420671d741", "title": "Matplotlib animations mac os x (using built in codecs)", "url": "https://kaushikghose.wordpress.com/2014/01/22/matplotlib-animations-mac-os-x-using-built-in-codecs/", "published_at": "2014-01-22T18:42:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c5420720cfa7", "title": "Preview and signatures", "url": "https://kaushikghose.wordpress.com/2014/01/20/preview-and-signatures/", "published_at": "2014-01-20T15:54:00+00:00" }, { "id": "01a0bbdf-9e48-70af-bc08-c54207b8ac00", "title": "iTunes and multiple monitors", "url": "https://kaushikghose.wordpress.com/2014/01/16/itunes-and-multiple-monitors/", "published_at": "2014-01-16T15:56:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6b7e95323", "title": "mmap is not better for sequential reads", "url": "https://kaushikghose.wordpress.com/2014/01/09/mmap-is-not-better-for-sequential-reads/", "published_at": "2014-01-09T16:10:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6b8bbfa5a", "title": "Quitclaim deeds, land records and all THAT", "url": "https://kaushikghose.wordpress.com/2013/12/20/quitclaim-deeds-land-records-and-all-that/", "published_at": "2013-12-20T11:52:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6b935e6a4", "title": "Massachusetts State Government registry for lead in rentals/homes", "url": "https://kaushikghose.wordpress.com/2013/12/13/massachusetts-state-government-registry-for-lead-in-rentals-homes/", "published_at": "2013-12-13T18:53:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6b9d510bd", "title": "Docopt is amazing", "url": "https://kaushikghose.wordpress.com/2013/12/08/docopt-is-amazing/", "published_at": "2013-12-08T06:13:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6ba785c4d", "title": "Database diagrams and sqlite on the cheap", "url": "https://kaushikghose.wordpress.com/2013/12/05/database-diagrams-and-sqlite-on-the-cheap/", "published_at": "2013-12-06T00:40:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6ba8c2bdd", "title": "Store numpy arrays in sqlite", "url": "https://kaushikghose.wordpress.com/2013/12/05/store-numpy-arrays-in-sqlite/", "published_at": "2013-12-05T12:45:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6bb8a21b2", "title": "Remove files from git versioning but don’t delete them", "url": "https://kaushikghose.wordpress.com/2013/12/04/remove-files-from-git-versioning-but-dont-delete-them/", "published_at": "2013-12-04T22:08:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6bbb8a51d", "title": "Pandas, multiindex, date, HDFstore and frame_tables", "url": "https://kaushikghose.wordpress.com/2013/12/02/pandas-multiindex-date-hdfstore-and-frame_tables/", "published_at": "2013-12-03T00:18:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6bc7245ab", "title": "Setting up a virtualenv to run pandas-dev", "url": "https://kaushikghose.wordpress.com/2013/11/30/setting-up-a-virtualenv-to-run-pandas-dev/", "published_at": "2013-11-30T16:29:00+00:00" }, { "id": "01a0bbe2-e5d7-70d6-bfb0-2af6bcc82e16", "title": "Random numbers in a parallel world", "url": "https://kaushikghose.wordpress.com/2013/11/22/random-numbers-in-a-parallel-world/", "published_at": "2013-11-22T16:27:55+00:00" } ] posts Claim your blog

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2014

git merge original ↗

24 Nov 2014

cdef vs cpdef original ↗

12 Nov 2014

The Felix problem original ↗

9 Nov 2014

CFFI-ize!original ↗

25 Oct 2014

maximum [1..1e6]original ↗

26 Sept 2014

An annoying thing with Python slices original ↗

9 Sept 2014

Mac OS + ‘cat’ + ‘sed’ + \n = half-assed original ↗

6 Sept 2014

Random list of things aimed at improving Python speed original ↗

4 Sept 2014

Fixing the big mess with git and case insensitive filesystems original ↗

3 Sept 2014

A funny thing with Python __getitem__()original ↗

29 Aug 2014

Big numbers in Python original ↗

25 Aug 2014

Numpy: a note on slicing efficiency original ↗

25 Aug 2014

The year humans lost a pair of chromosomes original ↗

20 Aug 2014

Python blist.sortedlist original ↗

17 Aug 2014

bcolz, numpy and plain Python original ↗

14 Aug 2014

Looping over a list of files in Bash original ↗

13 Aug 2014

Nosetests and pdb original ↗

9 Aug 2014

Nose and test generators original ↗

29 Jul 2014

Cythonize!original ↗

28 Jul 2014

numpy and testing original ↗

26 Jul 2014

Making docopt and Sphinx work together original ↗

25 Jul 2014

Some notes on Python imports and project organization original ↗

23 Jul 2014

Use numpydoc + sphinx original ↗

22 Jul 2014

A note on “The Worst Programming Interview Question”original ↗

13 Jul 2014

Recap: Python list indexing is O(1)original ↗

10 Jul 2014

Mac OS X: Coding in the dark original ↗

10 Jul 2014

Python: To format or to concatenate original ↗

7 Jul 2014

Doctests or nosetests?original ↗

6 Jul 2014

Python string concatenation original ↗

5 Jul 2014

numpy arrays and iterators original ↗

5 Jul 2014

HDF5 is not for fast access original ↗

3 Jul 2014

A note on Python’s __exit__() and errors original ↗

20 Jun 2014

The masked chromosome original ↗

16 Jun 2014

Feedburner and the fragmentation of google original ↗

1 Jun 2014

Python ‘or’original ↗

21 May 2014

PyVCF and header lines original ↗

20 May 2014

Finder on Mavericks slowing down?original ↗

13 May 2014

The engineer’s disease original ↗

10 May 2014

Darwin and case sensitivity in filenames original ↗

6 May 2014

Doctesting Python command line scripts original ↗

5 May 2014

Storing state in a Python function original ↗

5 May 2014

Python: Maps, Comprehensions and Loops original ↗

1 May 2014

Python doctest and functions that do file I/O original ↗

1 May 2014

How to tell if a property is a rental original ↗

30 Apr 2014

What makes marine grade wire special?original ↗

29 Apr 2014

Breaking BAM original ↗

28 Apr 2014

Adjusting sticking doors original ↗

27 Apr 2014

Bash conditionals original ↗

23 Apr 2014

I’m puzzled by executive compensation original ↗

17 Apr 2014

The magic of mmap original ↗

14 Apr 2014

The logging overhead.original ↗

14 Apr 2014

The utility of wealth original ↗

10 Apr 2014

Bash: print commands as they execute original ↗

9 Apr 2014

Python: passing a mix of keyword arguments and dictionary arguments to a function original ↗

4 Apr 2014

Washing machine hoses original ↗

31 Mar 2014

execfile and imported modules original ↗

31 Mar 2014

Raw (unaligned), paired reads in a BAM file original ↗

28 Mar 2014

SAM! BAM! VCF! What?original ↗

26 Mar 2014

Text File formats – ASCII Delimited Text – Not CSV or TAB delimited text original ↗

26 Mar 2014

Parameter files in Python for Python programs original ↗

25 Mar 2014

git subtree split original ↗

24 Mar 2014

Another reason to love PyCharm original ↗

19 Mar 2014

Why do we use ASCII files in genomics?original ↗

17 Mar 2014

Ghost in the wiring original ↗

13 Mar 2014

Docopt notes original ↗

11 Mar 2014

Desitin diaper cream original ↗

28 Feb 2014

Interviewing contractors original ↗

17 Feb 2014

Stork Craft Tuscany 4-in-1 Stages Crib original ↗

13 Feb 2014

Some thoughts on photography original ↗

13 Feb 2014

Chasing the ceramic soap dish original ↗

10 Feb 2014

Adventures in hiring plumbers original ↗

10 Feb 2014

How much space do I need?original ↗

10 Feb 2014

Life insurance = sleaze original ↗

10 Feb 2014

Refrigerators original ↗

10 Feb 2014

Title Insurance original ↗

10 Feb 2014

GFCI original ↗

10 Feb 2014

Interior modeling software original ↗

10 Feb 2014

Oliver original ↗

10 Feb 2014

A Dishwasher in an old kitchen original ↗

10 Feb 2014

What to look for on a tour original ↗

10 Feb 2014

Lead original ↗

10 Feb 2014

Sunlight original ↗

10 Feb 2014

Picking a home inspector original ↗

10 Feb 2014

Property and Privacy original ↗

10 Feb 2014

Central Vacuum Systems original ↗

10 Feb 2014

A lame adventure with progressiveCactus original ↗

6 Feb 2014

Compiling progressiveCactus on Mac Mavericks original ↗

25 Jan 2014

Matplotlib animations mac os x (using built in codecs)original ↗

22 Jan 2014

Preview and signatures original ↗

20 Jan 2014

iTunes and multiple monitors original ↗

16 Jan 2014

mmap is not better for sequential reads original ↗

9 Jan 2014

2013

Quitclaim deeds, land records and all THAT original ↗

20 Dec 2013

Massachusetts State Government registry for lead in rentals/homes original ↗

13 Dec 2013

Docopt is amazing original ↗

8 Dec 2013

Database diagrams and sqlite on the cheap original ↗

6 Dec 2013

Store numpy arrays in sqlite original ↗

5 Dec 2013

Remove files from git versioning but don’t delete them original ↗

4 Dec 2013

Pandas, multiindex, date, HDFstore and frame_tables original ↗

3 Dec 2013

Setting up a virtualenv to run pandas-dev original ↗

30 Nov 2013

Random numbers in a parallel world original ↗

22 Nov 2013