corpus.blog
41554 blogs · [ { "id": "01a0876e-1602-727d-8471-8416088e079c", "title": "The Asus Turbo AI R9700 Pro on Linux", "url": "http://dmnfarrell.github.io/bioinformatics/asus-r9700pro-setup", "published_at": "2026-07-28T12:20:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee927575133", "title": "Plot a phylogenetic tree with bokeh and biopython", "url": "http://dmnfarrell.github.io/bioinformatics/bokeh-phylogeny", "published_at": "2024-10-25T20:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee9281df397", "title": "Bacterial species identification from WGS using 16S genes", "url": "http://dmnfarrell.github.io/bioinformatics/bacterial-species-16S", "published_at": "2024-06-04T12:30:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee9290059ee", "title": "Plot and colour a minimum spanning tree with networkx", "url": "http://dmnfarrell.github.io/bioinformatics/mst-python", "published_at": "2024-05-31T10:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee929c5aae2", "title": "An updated convenience function for ggtree with heatmaps", "url": "http://dmnfarrell.github.io/r/ggplottree", "published_at": "2024-05-30T12:19:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92ac05f17", "title": "Calculate PubMLST sequence types using Python", "url": "http://dmnfarrell.github.io/bioinformatics/pubmlst-python", "published_at": "2024-03-29T13:50:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92b6afb4a", "title": "Two quick ways of building a bacterial species phylogeny", "url": "http://dmnfarrell.github.io/bioinformatics/bacterial-species-phylogeny", "published_at": "2024-03-22T12:30:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92bb95854", "title": "Filtering a QTableView with QSortFilterProxyModel", "url": "http://dmnfarrell.github.io/python/filtering-proxymodel-pyqt", "published_at": "2024-01-28T13:30:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92c64420c", "title": "Finding genes in a genome or assembly with Python", "url": "http://dmnfarrell.github.io/bioinformatics/finding-genes-in-assembly-python", "published_at": "2024-01-21T11:40:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92ce69c3e", "title": "Fetch assemblies and associated biosample data using Entrez tools with Biopython", "url": "http://dmnfarrell.github.io/bioinformatics/entrez-assembly-biosample-data-python", "published_at": "2024-01-19T16:10:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92d4e7de7", "title": "Excess mortality in Ireland still high in 2023", "url": "http://dmnfarrell.github.io/general/ireland-excess-deaths-2023", "published_at": "2024-01-05T10:15:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92d64b6b8", "title": "A Panel app for image-to-image generation", "url": "http://dmnfarrell.github.io/general/img2img-panel-app", "published_at": "2023-12-29T11:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92dcc3b9d", "title": "image-to-image with Stable Diffusion in Python", "url": "http://dmnfarrell.github.io/general/stable-diff-img2img", "published_at": "2023-12-18T11:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92e235931", "title": "Speech diarization with OpenAI whisper and pyannote.audio", "url": "http://dmnfarrell.github.io/general/whisper-diarization", "published_at": "2023-11-12T19:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92e349bd0", "title": "Condition Stable Diffusion images with ControlNet", "url": "http://dmnfarrell.github.io/general/controlnet-python", "published_at": "2023-09-21T09:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92eddc342", "title": "AI art with Stable Diffusion in Python", "url": "http://dmnfarrell.github.io/general/stable-diff-python", "published_at": "2023-09-19T10:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee92f61773e", "title": "SNP clustering and type naming of pathogens from WGS", "url": "http://dmnfarrell.github.io/bioinformatics/wgs-snp-clustering", "published_at": "2023-09-15T12:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee9301d9736", "title": "A phylogenetic tree viewer with PyQt and ToyTree", "url": "http://dmnfarrell.github.io/bioinformatics/tree-viewer-python-toytree", "published_at": "2023-06-18T13:30:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee93074e7d9", "title": "Simulate land parcels and fragmentation with geopandas", "url": "http://dmnfarrell.github.io/python/land-parcel-network", "published_at": "2023-03-22T14:00:00+00:00" }, { "id": "01a0876e-1603-7270-b55d-2ee9311b3d14", "title": "An individual based model of farm pathogen spread with Python/Mesa", "url": "http://dmnfarrell.github.io/python/btbabm-mesa", "published_at": "2023-03-19T14:00:00+00:00" } ] posts Claim your blog
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2026

The Asus Turbo AI R9700 Pro on Linuxoriginal ↗
28 Jul 2026

2024

Plot a phylogenetic tree with bokeh and biopythonoriginal ↗
25 Oct 2024
Bacterial species identification from WGS using 16S genesoriginal ↗
4 Jun 2024
Plot and colour a minimum spanning tree with networkxoriginal ↗
31 May 2024
An updated convenience function for ggtree with heatmapsoriginal ↗
30 May 2024
Calculate PubMLST sequence types using Pythonoriginal ↗
29 Mar 2024
Two quick ways of building a bacterial species phylogenyoriginal ↗
22 Mar 2024
Filtering a QTableView with QSortFilterProxyModeloriginal ↗
28 Jan 2024
Finding genes in a genome or assembly with Pythonoriginal ↗
21 Jan 2024
Fetch assemblies and associated biosample data using Entrez tools with Biopythonoriginal ↗
19 Jan 2024
Excess mortality in Ireland still high in 2023original ↗
5 Jan 2024

2023

A Panel app for image-to-image generationoriginal ↗
29 Dec 2023
image-to-image with Stable Diffusion in Pythonoriginal ↗
18 Dec 2023
Speech diarization with OpenAI whisper and pyannote.audiooriginal ↗
12 Nov 2023
Condition Stable Diffusion images with ControlNetoriginal ↗
21 Sept 2023
AI art with Stable Diffusion in Pythonoriginal ↗
19 Sept 2023
SNP clustering and type naming of pathogens from WGSoriginal ↗
15 Sept 2023
A phylogenetic tree viewer with PyQt and ToyTreeoriginal ↗
18 Jun 2023
Simulate land parcels and fragmentation with geopandasoriginal ↗
22 Mar 2023
An individual based model of farm pathogen spread with Python/Mesaoriginal ↗
19 Mar 2023